Closed atolopko-czi closed 9 months ago
This fix causes performance regressions:
The performance loss may be regained once SOMA's blockwise
implementation uses its faster internal indexer (over the current Pandas indexer).
Not clear on the cause of the memory usage increase, but as users can tune memory usage with soma_chunk_size
, we'll have to live with this until further effort can be put into re-tuning memory usage.
All modified and coverable lines are covered by tests :white_check_mark:
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) 86.17% compared to head (c49c2c5
) 86.17%. Report is 1 commits behind head on main.
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Fixes #955
Remove dependency upon a private method that is removed as of tiledbsoma 1.7.0