Call VADR only on SC2 samples

chanzuckerberg / idseq-workflows

Portable WDL workflows for IDseq production pipelines

https://idseq.net/

MIT License

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Call VADR only on SC2 samples #103

Closed kislyuk closed 3 years ago

kislyuk commented 3 years ago

As per our discussion. This causes the relevant outputs to all be null if `ref_accession_id is set (a proxy for general CG). Added comments regarding possible future improvements to make VADR run on more viruses and references.