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chanzuckerberg / idseq-workflows

Portable WDL workflows for IDseq production pipelines
https://idseq.net/
MIT License
31 stars 12 forks source link

Separate step and integration tests #173

Closed rzlim08 closed 2 years ago

rzlim08 commented 2 years ago

Separated the step and integration tests for consensus genomes, added the integration tests to self-hosted runners.

Time to run tests is down from ~22 minutes to ~8 minutes. It probably won't get much lower as a lot of the time now is for setup.

Also taking advantage of caching for the integration tests.