chanzuckerberg / idseq-workflows

Portable WDL workflows for IDseq production pipelines
https://idseq.net/
MIT License
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add host_filter RunStar test case using smaller ERCC database #22

Closed mlin closed 4 years ago

mlin commented 4 years ago

The STAR human reference index was much too large to use for unit testing. Adds a case (on the same synthetic input) using the smaller ERCC database. The output is vacuous but that was also true for the human reference, as this synthetic input doesn't include extraneous sequences.