This adds a color picker that informs the user of the current color configuration and gives a venn diagram visualization of the relationship between Alignment Candidates, Good Alignments, Read Graph edges, and reference overlaps.
Nice! I will merge it as is, but when you can please change writeColorPicker to be a member function of class Assembler. As written, it is a free standing function outside the shasta namespace.
This adds a color picker that informs the user of the current color configuration and gives a venn diagram visualization of the relationship between Alignment Candidates, Good Alignments, Read Graph edges, and reference overlaps.