This adds some methods to load a PAF as a graph, and integrates edge labeling into the AlignmentCandidateGraph. Additionally, a feature has been added to the Candidates page which allows the user to only visualize the reference graph edges.
An example of the reference graph, colored by inclusion in reference only (red), candidates (purple), good alignments (blue), and read graph edges (green):
This adds some methods to load a PAF as a graph, and integrates edge labeling into the AlignmentCandidateGraph. Additionally, a feature has been added to the Candidates page which allows the user to only visualize the reference graph edges.
An example of the reference graph, colored by inclusion in reference only (red), candidates (purple), good alignments (blue), and read graph edges (green):