search

chanzuckerberg / shasta

[MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads
Other
272 stars 59 forks source link

Export method for marker alignments #253

Closed rlorigro closed 3 years ago

rlorigro commented 3 years ago

This method writes out all the marker alignments to files in [assemblyDirectory]/Alignments/ containing the following data:

kmerId,ordinal0,ordinal1,rlePosition0,rlePosition1,
rlorigro commented 3 years ago

accidentally added the Bandage script to this PR, I can edit/redo if you want