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chanzuckerberg / single-cell-curation

Code and documentation for the curation of cellxgene datasets
MIT License
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cellxgene-schema must warn about quality issues in assay_ontology_term_id #286

Closed brianraymor closed 10 months ago

brianraymor commented 2 years ago

To improve data quality, cellxgene-schema must warn when:

  1. The value of assay_ontology_term_id is EFO:0008913 for "single-cell RNA sequencing".
brianraymor commented 2 years ago

@jahilton - should there be a similar warning for "single nucleus RNA sequencing"?

jahilton commented 2 years ago

Yes, that makes sense

brianraymor commented 10 months ago

Per November 27 triage, @jahilton agreed to close as low value.