chanzuckerberg / single-cell-curation

Code and documentation for the curation of cellxgene datasets
MIT License
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cellxgene-schema must validate cell_type_ontology_term_id #517

Closed brianraymor closed 1 year ago

brianraymor commented 1 year ago

Design

See cell_type_ontology_term_id.

cell_type_ontology_term_id

Key cell_type_ontology_term_id
Annotator Curator
Value categorical with str categories. This MUST be a CL term.

If no appropriate high-level term can be found or the cell type is unknown, then it is STRONGLY RECOMMENDED to use "CL:0000003" for native cell. The following terms MUST NOT be used:


nayib-jose-gloria commented 1 year ago

@jahilton / @corismall ready for testing!

jahilton commented 1 year ago

Passes QA. Good-to-go QA notebook