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chanzuckerberg / single-cell-explorer

Hosted version of cellxgene
MIT License
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[Placeholder] Changes to deep zoom scale bar for Visium CytAssist Spatial Gene Expression, 11mm #1146

Open brianraymor opened 4 days ago

brianraymor commented 4 days ago

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From cell-sci-applications:

@kaloster wrote:

Hey Brian, the 11mm assay does affect calculations for the deep zoom scale bar in Explorer - we’re currently basing the calculation on a default 8mm slide for Visium. This means that we would have to add a field to identify the assay type in CXG’s uns[“spatial”] object as part of the conversion script, and in turn add the relevant conditions for calculation on the Explorer side of things. I can start working on that later on today