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chapmanb / bcbb

Incubator for useful bioinformatics code, primarily in Python and R
http://bcbio.wordpress.com
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sort -V option is not supported on OSX #107

Closed brainstorm closed 8 years ago

brainstorm commented 8 years ago

Thanks for your script Brad, it worked like a charm except that small change. bedtools merge seems to work well without that extra -V flag (just with key sorting with -k):

http://stackoverflow.com/questions/4265284/how-to-do-sort-v-in-osx

chapmanb commented 8 years ago

Roman -- thanks much for this heads up. I pushed a set of fixes that include this to avoid any issues on OSX.