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chapmanb / bcbb

Incubator for useful bioinformatics code, primarily in Python and R
http://bcbio.wordpress.com
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glimmergff_to_proteins.py / Alternative Codon Table #132

Open zeynepkurtw opened 3 years ago

zeynepkurtw commented 3 years ago

Hi,

I'd like to add this issue for those who'd like to use the script with an alternative codon table.

Example: If you want to translate the sequence with a codon table 6 you need to change the script like the following, protein_seq = gene_seq.translate(6)

Regards, Zeynep