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chapmanb / bcbio.variation

Toolkit to analyze genomic variation data, built on the GATK with Clojure
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support for non human data. #27

Open timknut opened 9 years ago

timknut commented 9 years ago

Hi! Does this software support for non human diploid data like bovine with 29 autosomes?

best, Tim

chapmanb commented 9 years ago

Tim; Yes. There are some facilities to make it easier to deal with human data but you should be able to do comparisons with any set of variants and reference genome. Are you running into specific issues?

timknut commented 9 years ago

No, I'll follow up if I do. Thanks.

  1. feb. 2015 11:24 skrev "Brad Chapman" notifications@github.com:

Tim; Yes. There are some facilities to make it easier to deal with human data but you should be able to do comparisons with any set of variants and reference genome. Are you running into specific issues?

— Reply to this email directly or view it on GitHub https://github.com/chapmanb/bcbio.variation/issues/27#issuecomment-73024479 .