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chapmanb / bcbio.variation

Toolkit to analyze genomic variation data, built on the GATK with Clojure
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core.match compile issue #8

Closed lynaghk closed 12 years ago

lynaghk commented 12 years ago

Upstream compilation problem with core.match. Bumping to alpha10 does not resolve.

Exception in thread "main" java.lang.IllegalArgumentException: No method in multimethod 'to-source' for dispatch value: class clojure.core.match.WildcardPattern, compiling:(bcbio/variation/filter/classify.clj:70)
        at clojure.lang.Compiler.analyzeSeq(Compiler.java:6462)
        at clojure.lang.Compiler.analyze(Compiler.java:6262)
        at clojure.lang.Compiler.analyze(Compiler.java:6223)
        at clojure.lang.Compiler$BodyExpr$Parser.parse(Compiler.java:5618)
        at clojure.lang.Compiler$LetExpr$Parser.parse(Compiler.java:5919)
        at clojure.lang.Compiler.analyzeSeq(Compiler.java:6455)
        at clojure.lang.Compiler.analyze(Compiler.java:6262)
        at clojure.lang.Compiler.analyzeSeq(Compiler.java:6443)
        at clojure.lang.Compiler.analyze(Compiler.java:6262)
        at clojure.lang.Compiler.analyze(Compiler.java:6223)