fixes an issue in gnomad exome and genome for hg19 and hg38

chapmanb / cloudbiolinux

CloudBioLinux: configure virtual (or real) machines with tools for biological analyses

http://cloudbiolinux.org

MIT License

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fixes an issue in gnomad exome and genome for hg19 and hg38 #301

Closed naumenko-sa closed 5 years ago

naumenko-sa commented 5 years ago

fixes this https://github.com/bcbio/bcbio-nextgen/issues/2816 all 6 recipes tested with a small file test

chapmanb commented 5 years ago

Sergey -- thanks so much for the fixes and keeping this up to date. I'm mostly trying to keep up with all your adjustments, so let me know if I miss anything at all. Much appreciated.