chapmanb / cloudbiolinux

CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
http://cloudbiolinux.org
MIT License
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gnomad moved to the gcloud. fixed hg38 recipes #400

Closed naumenko-sa closed 2 years ago

wangpenhok commented 1 year ago

Hello~ while I prepared gnomad files according to the recipe, it seems that the filed names have been changed in the latest gnomad files. Here are some examples: `##INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=

INFO=`

It is obvious that _ has been replaced with -. In addition, male/female seems to be XY/XX now. Would you please update the file gnomad_fields_to_keep into the latest version? Thanks~