chapmanb / cloudbiolinux

CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
http://cloudbiolinux.org
MIT License
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Update miRBase download URLs #413

Closed rchekaluk closed 8 months ago

rchekaluk commented 10 months ago

Fixes https://github.com/bcbio/bcbio-nextgen/issues/3721 by changing www.mirbase.org to mirbase.org Fixes https://github.com/bcbio/bcbio-nextgen/issues/3722 by changing 21/genomes and 22/genomes URLs to current download URLs Fixes https://github.com/bcbio/bcbio-nextgen/issues/3723 by changing to current download URLs and not decompressing

Does not fix https://github.com/bcbio/bcbio-nextgen/issues/3724 Does not fix https://github.com/bcbio/bcbio-nextgen/issues/3725

This has not been tested end-to-end via bcbio-nextgen, however all revised URLs have been validated manually.

The revised URLs have not been confirmed with mirbase@manchester.ac.uk, but you may want to review it with them before merging.