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chasewnelson
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SNPGenie
Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
GNU General Public License v3.0
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SNPGenie with CRISP output
#24
mullerbsf
closed
4 years ago
7
error: gtf does not contain any sense (+) strand products. SNPGenie terminated.
#23
katarinabraun
closed
4 years ago
7
column header "ID"
#22
genferreri
closed
4 years ago
6
Gene diversity (observed heterozygosity)
#21
mullerbsf
closed
4 years ago
2
Troubleshooting and STOP codon
#20
mullerbsf
closed
4 years ago
3
sliding window error with new version compared to old version.
#19
mschoup
closed
5 years ago
2
how does SNPGenie deal with invariant sites?
#18
mufernando
closed
5 years ago
3
Multi-Fasta Reference Issue & Output Nucleotide Diversity for all Sites (Not Only Variant)
#17
j3551ca
closed
5 years ago
4
Results _ File/ Just one CDS
#16
StephanieRodrigues
closed
5 years ago
6
GTF problems and empty outputs
#15
StephanieRodrigues
closed
5 years ago
7
vcf2revcom.pl - No modifications to the fasta and gtf file
#14
lchallagundla
closed
5 years ago
4
Input error gtf
#13
HirokiTomida
closed
5 years ago
14
vcf2revcom.pl - wrong gtf output?
#12
NurislamSheih
closed
5 years ago
15
mulifasta genome questions
#11
binshuangli
closed
5 years ago
2
gtf error, SNPGenie terminated
#10
binshuangli
closed
5 years ago
4
score in GTF file, parsing problem
#9
WardDeb
closed
5 years ago
2
Empty output / wrong VCF file?
#8
WardDeb
closed
5 years ago
2
memory usage
#7
lurebgi
closed
6 years ago
1
Two products have the same starting position, causing an error.
#6
peterdfields
closed
8 years ago
7
Problem with VCF
#5
DRL
closed
8 years ago
3
Variance input format of vcf
#4
HamletShaoE
closed
8 years ago
3
Invalid FASTA file
#3
kloetzl
closed
8 years ago
2
Missing License
#2
kloetzl
closed
8 years ago
2
Improve upon the README
#1
singing-scientist
closed
9 years ago
0
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