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cheeseman-lab / brieflow

Extensible pipeline tool for processing optical pooled screens data.
MIT License
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Allocate HPC Resources #7

Open roshankern opened 2 weeks ago

roshankern commented 2 weeks ago

For now all of the Brieflow testing has been done locally. Long term, we need to consider how Brieflow can most easily be run on Slurm/other clusters.

roshankern commented 2 weeks ago

Sunbeam instructions for running on Slurm Clusters:

https://sunbeam.readthedocs.io/en/stable/examples.html#running-on-a-slurm-cluster