Improve worker fault tolerance

[nclopezo]

This adds a script that exits until no workers are busy. It can receive a regex to match with the workers' name. It can be called like this:

./manage_glados_no_install.sh waitunitlworkersarefree

Or

./manage_glados_no_install.sh waitunitlworkersarefree 'some_prefix.*'

This will be used in our deployment process to avoid killing and breaking running jobs.

[nclopezo]

This is for https://github.com/chembl/GLaDOS/issues/1076

[chembl-bot]

I am going to a start test server for b91f801871cab19f89e5af24cbea712ef2363b6c

[chembl-bot]

I am going to a start test server for b91f801871cab19f89e5af24cbea712ef2363b6c

[chembl-bot]

Starting Ghost inspector tests on http://wwwdev.ebi.ac.uk/chembl/test1/improve-worker-fault-tolerance/

[chembl-bot]

Ghost inspector tests results, passed: False

Tested Commit: b91f801871cab19f89e5af24cbea712ef2363b6c

Suite Name: Basic

• Name: Drugs - link to activities is there, Passing: 😎True, See Result
• Name: Free text search works, Passing: 😎True, See Result
• Name: Full query filters work, Passing: 😎True, See Result
• Name: Main page is correct, Passing: 😎True, See Result
• Name: Search Results - Assays Filters Work, Passing: 😎True, See Result
• Name: Search Results - Cell Line Filters Work, Passing: 😎True, See Result
• Name: Search Results - Compound Filters Work, Passing: 😎True, See Result
• Name: Search Results - Documents Filters Work, Passing: 😎True, See Result
• Name: Search Results - Links to other entities work, Passing: 😎True, See Result
• Name: Search Results - Matrix Full Screen Works, Passing: 😎True, See Result
• Name: Search Results - Matrix Works, Passing: 😎True, See Result
• Name: Search Results - Scatter Plot Works, Passing: 😎True, See Result

All passing: True

Suite Name: Report Cards

• Name: Assay - Basic Information, Passing: 😎True, See Result
• Name: Assay - Curation Summary, Passing: 😎True, See Result
• Name: Cell Line - Basic Information, Passing: 😎True, See Result
• Name: Document - Basic Information, Passing: 😎True, See Result
• Name: Target - Approved drugs and clinical candidates, Passing: 😎True, See Result
• Name: Target - Name and Classification, Passing: 😎True, See Result
• Name: Target - Relations, Passing: 😎True, See Result
• Name: Tissue - Basic Information, Passing: 😎True, See Result

All passing: True

Suite Name: ReportCards - Compound

• Name: Compound - Alternate Forms, Passing: 😎True, See Result
• Name: Compound - Compound Representations - Is hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Inexisting compound, Passing: 😎True, See Result
• Name: Compound - Mechanism of Action - Is hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Mechanisms of action, Passing: 😎True, See Result
• Name: Compound - Molecule Features, Passing: 😎True, See Result
• Name: Compound - Molecule Features - Is hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Molecule Features - Second Row is hidden when is not approved drug, Passing: 😎True, See Result
• Name: Compound - Name and Classification, Passing: 😎True, See Result
• Name: Compound - Name and Classification - Compound with no structure must not show zoom or 3d buttons, Passing: 😎True, See Result
• Name: Compound - Name and Classification - Molformula is hidden when not avaiable, Passing: 😎True, See Result
• Name: Compound - Name and Classification - Synonyms/Trade Names are hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Representations, Passing: 😎True, See Result
• Name: Compound - Similar Compounds Card, Passing: 😎True, See Result
• Name: Compound - Unichem Connectivity Matches, Passing: 😎True, See Result

All passing: True

Suite Name: State URLs and Query editing

• Name: Breadcrumbs work after tab and state changes in search results, Passing: 😎True, See Result
• Name: Entity Browsers allow state object in url, Passing: 😎True, See Result
• Name: Search results page can be created from a state in url, Passing: 😎True, See Result
• Name: State urls work after selecting hidden filters, Passing: 😎True, See Result

All passing: True

Suite Name: Downloads

• Name: A dynamic file can be downloaded, Passing: 😎True, See Result
• Name: Filtered assays can be downloaded, Passing: 😡False, See Result
• Name: Filtered cell lines can be downloaded, Passing: 😡False, See Result
• Name: Filtered compounds can be downloaded, Passing: 😡False, See Result
• Name: Filtered documents can be downloaded, Passing: 😡False, See Result
• Name: Filtered targets can be downloaded, Passing: 😡False, See Result
• Name: Tissues can be downloaded, Passing: 😡False, See Result

All passing: False

Suite Name: Sequence and Structure Searches

• Name: Connectivity Search - Link to other entities works, Passing: 😎True, See Result
• Name: Connectivity Search, Passing: 😎True, See Result
• Name: BLAST Search Works, Passing: 😎True, See Result
• Name: BLAST Search params can be edited, Passing: 😎True, See Result
• Name: Search Results - Target Filters Work, Passing: 😎True, See Result
• Name: Similarity Search - Link to activities works, Passing: 😎True, See Result
• Name: Similarity Search Works, Passing: 😎True, See Result
• Name: Substructure search - link to activities works, Passing: 😎True, See Result
• Name: Substructure search works, Passing: 😎True, See Result

All passing: True

Suite Name: Redirections

• Name: Assay Report Card Redirection Works, Passing: 😎True, See Result
• Name: Cell Report Card Works, Passing: 😎True, See Result
• Name: Compound Report Card Redirection Works, Passing: 😎True, See Result
• Name: Document Report Card Works, Passing: 😎True, See Result
• Name: Target Report Card Redirection Works, Passing: 😎True, See Result
• Name: Tissue Report Card Redirection Works, Passing: 😎True, See Result
• Name: Web services documentation redirection works, Passing: 😎True, See Result

All passing: True

[chembl-bot]

I am going to a start test server for b91f801871cab19f89e5af24cbea712ef2363b6c

[chembl-bot]

Starting Ghost inspector tests on http://wwwdev.ebi.ac.uk/chembl/test1/improve-worker-fault-tolerance/

[chembl-bot]

Ghost inspector tests results, passed: True

Tested Commit: b91f801871cab19f89e5af24cbea712ef2363b6c

Suite Name: Basic

• Name: Drugs - link to activities is there, Passing: 😎True, See Result
• Name: Free text search works, Passing: 😎True, See Result
• Name: Full query filters work, Passing: 😎True, See Result
• Name: Main page is correct, Passing: 😎True, See Result
• Name: Search Results - Assays Filters Work, Passing: 😎True, See Result
• Name: Search Results - Cell Line Filters Work, Passing: 😎True, See Result
• Name: Search Results - Compound Filters Work, Passing: 😎True, See Result
• Name: Search Results - Documents Filters Work, Passing: 😎True, See Result
• Name: Search Results - Links to other entities work, Passing: 😎True, See Result
• Name: Search Results - Matrix Full Screen Works, Passing: 😎True, See Result
• Name: Search Results - Matrix Works, Passing: 😎True, See Result
• Name: Search Results - Scatter Plot Works, Passing: 😎True, See Result

All passing: True

Suite Name: Report Cards

• Name: Assay - Basic Information, Passing: 😎True, See Result
• Name: Assay - Curation Summary, Passing: 😎True, See Result
• Name: Cell Line - Basic Information, Passing: 😎True, See Result
• Name: Document - Basic Information, Passing: 😎True, See Result
• Name: Target - Approved drugs and clinical candidates, Passing: 😎True, See Result
• Name: Target - Name and Classification, Passing: 😎True, See Result
• Name: Target - Relations, Passing: 😎True, See Result
• Name: Tissue - Basic Information, Passing: 😎True, See Result

All passing: True

Suite Name: ReportCards - Compound

• Name: Compound - Alternate Forms, Passing: 😎True, See Result
• Name: Compound - Compound Representations - Is hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Inexisting compound, Passing: 😎True, See Result
• Name: Compound - Mechanism of Action - Is hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Mechanisms of action, Passing: 😎True, See Result
• Name: Compound - Molecule Features, Passing: 😎True, See Result
• Name: Compound - Molecule Features - Is hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Molecule Features - Second Row is hidden when is not approved drug, Passing: 😎True, See Result
• Name: Compound - Name and Classification, Passing: 😎True, See Result
• Name: Compound - Name and Classification - Compound with no structure must not show zoom or 3d buttons, Passing: 😎True, See Result
• Name: Compound - Name and Classification - Molformula is hidden when not avaiable, Passing: 😎True, See Result
• Name: Compound - Name and Classification - Synonyms/Trade Names are hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Representations, Passing: 😎True, See Result
• Name: Compound - Similar Compounds Card, Passing: 😎True, See Result
• Name: Compound - Unichem Connectivity Matches, Passing: 😎True, See Result

All passing: True

Suite Name: State URLs and Query editing

• Name: Breadcrumbs work after tab and state changes in search results, Passing: 😎True, See Result
• Name: Entity Browsers allow state object in url, Passing: 😎True, See Result
• Name: Search results page can be created from a state in url, Passing: 😎True, See Result
• Name: State urls work after selecting hidden filters, Passing: 😎True, See Result

All passing: True

Suite Name: Downloads

• Name: A dynamic file can be downloaded, Passing: 😎True, See Result
• Name: Filtered assays can be downloaded, Passing: 😎True, See Result
• Name: Filtered cell lines can be downloaded, Passing: 😎True, See Result
• Name: Filtered compounds can be downloaded, Passing: 😎True, See Result
• Name: Filtered documents can be downloaded, Passing: 😎True, See Result
• Name: Filtered targets can be downloaded, Passing: 😎True, See Result
• Name: Tissues can be downloaded, Passing: 😎True, See Result

All passing: True

Suite Name: Sequence and Structure Searches

• Name: Connectivity Search - Link to other entities works, Passing: 😎True, See Result
• Name: Connectivity Search, Passing: 😎True, See Result
• Name: BLAST Search Works, Passing: 😎True, See Result
• Name: BLAST Search params can be edited, Passing: 😎True, See Result
• Name: Similarity Search - Link to activities works, Passing: 😎True, See Result
• Name: Search Results - Target Filters Work, Passing: 😎True, See Result
• Name: Similarity Search Works, Passing: 😎True, See Result
• Name: Substructure search - link to activities works, Passing: 😎True, See Result
• Name: Substructure search works, Passing: 😎True, See Result

All passing: True

Suite Name: Redirections

• Name: Assay Report Card Redirection Works, Passing: 😎True, See Result
• Name: Cell Report Card Works, Passing: 😎True, See Result
• Name: Compound Report Card Redirection Works, Passing: 😎True, See Result
• Name: Document Report Card Works, Passing: 😎True, See Result
• Name: Target Report Card Redirection Works, Passing: 😎True, See Result
• Name: Tissue Report Card Redirection Works, Passing: 😎True, See Result
• Name: Web services documentation redirection works, Passing: 😎True, See Result

All passing: True