Get protein target hierarchy from dedicated endpoint

[nclopezo]

Fixes https://github.com/chembl/GLaDOS/issues/1055 The trees are now calculated by the backend, and not built via aggregations directly on elasticsearch. Also, it is now possible to explore the 3 target hierarchies (protein targets, organism taxonomy, and gene ontology)

[pep8speaks]

Hello @nclopezo! Thanks for updating this PR. We checked the lines you've touched for PEP 8 issues, and found:

There are currently no PEP 8 issues detected in this Pull Request. Cheers! :beers:

Comment last updated at 2019-12-04 11:24:05 UTC

[chembl-bot]

I am going to a start test server for 4b1f7ec8bcd3f22ad196d7f6f2f28e86ecc18017

[chembl-bot]

Starting Ghost inspector tests on http://wwwdev.ebi.ac.uk/chembl/test1/get-protein-target-hierarchy-from-dedicated-endpoint/

[chembl-bot]

Ghost inspector tests results, passed: False

Tested Commit: 4b1f7ec8bcd3f22ad196d7f6f2f28e86ecc18017

Suite Name: Basic

• Name: Activities Browser - links work, Passing: 😎True, See Result
• Name: Drugs - link to activities is there, Passing: 😎True, See Result
• Name: Free text search works, Passing: 😎True, See Result
• Name: Full query filters work, Passing: 😎True, See Result
• Name: Main page is correct, Passing: 😎True, See Result
• Name: Search Results - Assays Filters Work, Passing: 😎True, See Result
• Name: Search Results - Cell Line Filters Work, Passing: 😡False, See Result
• Name: Search Results - Compound Can be filtered by isDrug, Passing: 😎True, See Result
• Name: Search Results - Compound Filters Work, Passing: 😡False, See Result
• Name: Search Results - Documents Filters Work, Passing: 😡False, See Result
• Name: Search Results - Links to other entities work, Passing: 😡False, See Result
• Name: Search Results - Matrix Full Screen Works, Passing: 😎True, See Result
• Name: Search Results - Matrix Works, Passing: 😡False, See Result
• Name: Search Results - Scatter Plot Works, Passing: 😎True, See Result

All passing: False

Suite Name: Report Cards

• Name: Assay - Assay Params, Passing: 😎True, See Result
• Name: Assay - Basic Information, Passing: 😎True, See Result
• Name: Assay - Basic Information - BindingDB Link, Passing: 😎True, See Result
• Name: Assay - Basic Information - PubChem link, Passing: 😎True, See Result
• Name: Assay - Curation Summary, Passing: 😎True, See Result
• Name: Cell Line - Basic Information, Passing: 😎True, See Result
• Name: Document - Basic Information, Passing: 😎True, See Result
• Name: Target - Approved drugs and clinical candidates, Passing: 😎True, See Result
• Name: Target - Name and Classification, Passing: 😎True, See Result
• Name: Target - Relations, Passing: 😎True, See Result
• Name: Tissue - Basic Information, Passing: 😎True, See Result

All passing: True

Suite Name: ReportCards - Compound

• Name: Compound - Alternate Forms, Passing: 😡False, See Result
• Name: Compound - Compound Representations - Is hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Inexisting compound, Passing: 😎True, See Result
• Name: Compound - Mechanism of Action - Is hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Mechanisms of action, Passing: 😡False, See Result
• Name: Compound - Molecule Features, Passing: 😎True, See Result
• Name: Compound - Molecule Features - Is hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Molecule Features - Second Row is hidden when is not approved drug, Passing: 😎True, See Result
• Name: Compound - Name and Classification, Passing: 😎True, See Result
• Name: Compound - Name and Classification - Molformula is hidden when not avaiable, Passing: 😎True, See Result
• Name: Compound - Name and Classification - Synonyms/Trade Names are hidden when necessary, Passing: 😎True, See Result
• Name: Compound - Name and Classification for a compound with no structure, Passing: 😎True, See Result
• Name: Compound - Representations, Passing: 😎True, See Result
• Name: Compound - Similar Compounds Card, Passing: 😎True, See Result
• Name: Compound - Unichem Connectivity Matches, Passing: 😎True, See Result

All passing: False

Suite Name: State URLs and Query editing

• Name: Breadcrumbs work after tab and state changes in search results, Passing: 😎True, See Result
• Name: Entity Browsers allow state object in url, Passing: 😎True, See Result
• Name: Search results page can be created from a state in url, Passing: 😎True, See Result
• Name: State urls work after selecting hidden filters, Passing: 😎True, See Result

All passing: True

Suite Name: Downloads

• Name: A dynamic file can be downloaded, Passing: 😎True, See Result
• Name: Filtered assays can be downloaded, Passing: 😎True, See Result
• Name: Filtered cell lines can be downloaded, Passing: 😡False, See Result
• Name: Filtered compounds can be downloaded, Passing: 😡False, See Result
• Name: Filtered documents can be downloaded, Passing: 😡False, See Result
• Name: Filtered targets can be downloaded, Passing: 😡False, See Result
• Name: Tissues can be downloaded, Passing: 😡False, See Result

All passing: False

Suite Name: Sequence and Structure Searches

• Name: Connectivity Search, Passing: 😎True, See Result
• Name: Connectivity Search - Link to other entities works, Passing: 😎True, See Result
• Name: BLAST Search Works, Passing: 😎True, See Result
• Name: BLAST Search params can be edited, Passing: 😡False, See Result
• Name: Search Results - Target Filters Work, Passing: 😎True, See Result
• Name: Similarity Search - Link to activities works, Passing: 😎True, See Result
• Name: Similarity Search Works, Passing: 😎True, See Result
• Name: Similarity Search Works with a structure containing a #, Passing: 😎True, See Result
• Name: Substructure search - link to activities works, Passing: 😎True, See Result
• Name: Substructure search works, Passing: 😎True, See Result

All passing: False

Suite Name: Redirections

• Name: Assay Report Card Redirection Works, Passing: 😎True, See Result
• Name: Cell Report Card Works, Passing: 😎True, See Result
• Name: Compound Report Card Redirection Works, Passing: 😎True, See Result
• Name: Document Report Card Works, Passing: 😎True, See Result
• Name: FAQs redirection works, Passing: 😎True, See Result
• Name: Target Report Card Redirection Works, Passing: 😎True, See Result
• Name: Tissue Report Card Redirection Works, Passing: 😎True, See Result
• Name: Web services documentation redirection works, Passing: 😎True, See Result

All passing: True

[nclopezo]

Tests were manually checked, Ghost inspector is hitting the test server too hard.