Editing target dictionary

[Anneli15]

Trying to edit the target family details but the dig doesn't save the changes. Goes through but no details shown. I've tried both "save" and "save and continue editing". Is it a permission problem or something else?

[revajk]

Send me the details I shall try. and shall let you know what the problem is.

On 1 Dec 2015, at 12:02, Anneli15 notifications@github.com wrote:

Trying to edit the target family details but the dig doesn't save the changes. Goes through but no details shown. I've tried both "save" and "save and continue editing". Is it a permission problem or something else?

— Reply to this email directly or view it on GitHub https://github.com/chembl/IDG/issues/95.

[Anneli15]

Want to add to (ADRA1) Pref name:Adrenergic receptor alpha-1 Target ID: CHEMBL2094251 Type: PROTEIN FAMILY Components need to be: Alpha-1D adrenergic receptor, Alpha-1B adrenergic receptor, Alpha-1A adrenergic receptor, not sure how to select these in the box as they aren't in consecutive order. Need to plus/minus box like the one for references?

[revajk]

Anneli, Have fixed this doing a deployment now I will let you know once they are done. There wouldn’t be a disruption to the production as its not data migration this time.

On 1 Dec 2015, at 12:07, Anneli15 notifications@github.com wrote:

CHEMBL2094251

[revajk]

Should be available now.

On 1 Dec 2015, at 12:07, Anneli15 notifications@github.com wrote:

Want to add to (ADRA1) Pref name:Adrenergic receptor alpha-1 Target ID: CHEMBL2094251 Type: PROTEIN FAMILY Components need to be: Alpha-1D adrenergic receptor, Alpha-1B adrenergic receptor, Alpha-1A adrenergic receptor, not sure how to select these in the box as they aren't in consecutive order. Need to plus/minus box like the one for references?

— Reply to this email directly or view it on GitHub https://github.com/chembl/IDG/issues/95#issuecomment-160948964.

[Anneli15]

Great thanks! You even added the boxes, really nice, thank you!

[Anneli15]

The system doesn't like this edit for some reason, other editing I've done works.... The target doesn't exist as in there is no chembl ID for this family. And nothing shows up in the dictionary in IDG so not sure what the error message means.

[Anneli15]

About the boxes, great but is it possible to make then longer, maybe on top of each other instead of next to each other? As it is, I can't see which protein receptor I'm adding....

[revajk]

Got them fixed Anneli, I shall deploy them soon.

On 1 Dec 2015, at 14:37, Anneli15 notifications@github.com wrote:

About the boxes, great but is it possible to make then longer, maybe on top of each other instead of next to each other? As it is, I can't see which protein receptor I'm adding....

https://cloud.githubusercontent.com/assets/12811998/11503553/184ebdf0-9839-11e5-9cf2-a2d336a3b13e.png — Reply to this email directly or view it on GitHub https://github.com/chembl/IDG/issues/95#issuecomment-160985676.

[Anneli15]

Can you add the name for theses targets? I don't seem to be able to edit.

I\ve also tried adding target components but not able to do that, gives me an error 500. I have been able to edit family members though but can't add anything new.

[revajk]

Anneli, What are the names ?

[Anneli15]

Name description pref name NTRK1 Nerve growth factor receptor Trk-A Nerve growth factor receptor Trk-A FGFR4 Fibroblast growth factor receptor 4 Fibroblast growth factor receptor 4

[revajk]

I am not sure why you couldn’t edit NTRK1. I can edit them. FGFR4 - there seems to be a validation error. I will look further.

On 9 Dec 2015, at 14:29, Anneli15 notifications@github.com wrote:

Nerve growth factor receptor Trk-A

[revajk]

Have fixed them. Would do a deployment now.

On 9 Dec 2015, at 14:29, Anneli15 notifications@github.com wrote:

Name description pref name NTRK1 Nerve growth factor receptor Trk-A Nerve growth factor receptor Trk-A FGFR4 Fibroblast growth factor receptor 4 Fibroblast growth factor receptor 4

— Reply to this email directly or view it on GitHub https://github.com/chembl/IDG/issues/95#issuecomment-163259367.

[Anneli15]

I've logged out

[revajk]

No you don’t have to log out there may be a glitch but not for a long time. So you can continue to work.

On 9 Dec 2015, at 14:51, Anneli15 notifications@github.com wrote:

I've logged out

— Reply to this email directly or view it on GitHub https://github.com/chembl/IDG/issues/95#issuecomment-163273955.

[revajk]

And what are the target components?

[revajk]

Should be available.

On 9 Dec 2015, at 14:51, Anneli15 notifications@github.com wrote:

I've logged out

— Reply to this email directly or view it on GitHub https://github.com/chembl/IDG/issues/95#issuecomment-163273955.

[Anneli15]

Excellent, thank you!

[Anneli15]

Can you add a new target component for me please? It is: Pref name and description: Cyclin-Dependent Kinase 12 Name (HGNC symbol): CDK12 Uniprot ID: Q9NYV4 It is not in Chembl so no Chembl ID. I have added it as a target but as it is not in "components" I can't seem to be able to add it as part of a target family.

[revajk]

I Think you have added them already. ITs there in the target dictionary. CDK12

On 9 Dec 2015, at 15:38, Anneli15 notifications@github.com wrote:

Can you add a new target component for me please? It is: Pref name and description: Cyclin-Dependent Kinase 12 Name (HGNC symbol): CDK12 Uniprot ID: Q9NYV4 It is not in Chembl so no Chembl ID. I have added it as a target but as it is not in "components" I can't seem to add it as part of a target family.

— Reply to this email directly or view it on GitHub https://github.com/chembl/IDG/issues/95#issuecomment-163295836.

[Anneli15]

it is in the target dictionary but not in the component bit so I can't add it to target family.