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chembl / chembl_webresource_client

Official Python client for accessing ChEMBL API
https://www.ebi.ac.uk/chembl/api/data/docs
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possibility to do BLAST search #23

Closed MKorablyov closed 2 years ago

MKorablyov commented 7 years ago

Hello !

I am trying to retrieve a binding data for a small set of ~300 proteins of interest (retrieve all molecules for each of the proteins). ChEMBL has a possibility to do the BLAST search. I could not find it in the python API. Which way would you recommend ?

Thank you,

mnowotka commented 7 years ago

Yes, currently the API does not allow this functionality but I agree this is a good idea to add. I will mark this issue as enhancement and it will be closed once this is implemented so you should be notified when done.

eloyfelix commented 2 years ago

blast search on ChEMBL can be either done via ChEMBL's interface and EBI's Blast interface: https://www.ebi.ac.uk/Tools/sss/ncbiblast/