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chembl / mychembl

Resources used to create the myChEMBL virtual machine
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Configure ipython to work inside virtualenv. #3

Open mnowotka opened 10 years ago

mnowotka commented 10 years ago

Right now our ipython server is using globally installed software. To make it more modular and clean it should have it's own virtualenv.

madgpap commented 10 years ago

LIke

flatkinson commented 10 years ago

Probably, but, assuming myChEMBL is intended to be used as a headless server, it doesn't make much difference.

I can see that it might be useful to have notebooks using diiferent versions of packages (e.g. in cases like George's where an update breaks a workflow), but managing for the user could be confusing (different notebook servers running in different virtualenvs accessed by different links from the launcher?).

On 16/10/2014 15:54, Michał Nowotka wrote:

Right now our |ipython| server is using globally installed software. To make it more modular and clean it should have it's own virtualenv.

— Reply to this email directly or view it on GitHub https://github.com/chembl/mychembl/issues/3.

Dr Francis L Atkinson

Chemogenomics Group European Bioinformatics Institute (EMBL-EBI) European Molecular Biology Laboratory Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom

(01223) 494473

madgpap commented 8 years ago

we are using conda