I just stumbled across this project from the main LinkML's registry. Looks like an interesting start!
My view point is from the metabolic modeling space. Since you concern yourself with ChEBI and RHEA, I was wondering how far you are planning to go with this resource? As an example, one of my favorite resources is MetaNetX that also offers a SPARQL endpoint and RDF distribution. Since they have done the work of mapping a range of different source databases, it is quite convenient.
The metabolic models that I work with are typically encoded in SBML. So that is interesting to me both as a source and final output of information.
Hi there,
I just stumbled across this project from the main LinkML's registry. Looks like an interesting start!
My view point is from the metabolic modeling space. Since you concern yourself with ChEBI and RHEA, I was wondering how far you are planning to go with this resource? As an example, one of my favorite resources is MetaNetX that also offers a SPARQL endpoint and RDF distribution. Since they have done the work of mapping a range of different source databases, it is quite convenient.
The metabolic models that I work with are typically encoded in SBML. So that is interesting to me both as a source and final output of information.
Appreciate your thoughts on the topic 🙂