chengfgao / TopicVelo

TopicVelo: Dissection and Integration of Bursty Transcriptional Dynamics for Complex Systems
BSD 3-Clause "New" or "Revised" License
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Calculating topic-specific velocities #3

Open hdanderson opened 4 months ago

hdanderson commented 4 months ago

How are topic-specific velocities calculated from the parameters saved in Combined_Topics_Transitions? I saved them by directly modifying the function to write the velocity matrices to NPZ files, but this is not ideal. A discussion of the proper way to do this should be added to the tutorial.