gt readjoiner prefilter: error

[microbiaki]

Hello!

I am trying to run the example provide and I get the following error:

gt readjoiner prefilter: error: unknown option: -des (-help shows possible options) gt readjoiner spmtest: error: fopen(): cannot open file 'sample_out/rj/graph.set.0.spm': No such file or directory Traceback (most recent call last): File "reago.py", line 816, in G = create_graph_using_rj(read_db, "graph") File "reago.py", line 110, in create_graph_using_rj f = open(output_dir + "/rj/" + graph_fn + ".set.des") IOError: [Errno 2] No such file or directory: 'sample_out//rj/graph.set.des'

I have Ubuntu 14.04 and I installed genome tools through sudo apt-get install genometools

Did this cause the issue? Any ideas on how to fix it?

Thank you, Maria

[debjitde01]

I also have the same issue.. please help to solve this problem