I am emailing you because I have run into a problem with ASpli. We have some new data that we want to analyse, but I get the following error when I try to run ASpli in the exact same manner that I have run it for the other data sets we are using:
[1] "integrate signals"
Error in set(x, j = name, value = value) :
Supplied 1059 items to be assigned to 1061 items of column 'locus'. If you wish to 'recycle' the RHS please use rep() to make this intent clear to readers of your code.
If I change the settings of the thresholds given for the "integrate signals" function, it seems to use the new values, but still runs into the same problem (I think when making a data frame of the results).
[1] "integrate signals"
Error in set(x, j = name, value = value) :
Supplied 1651 items to be assigned to 1653 items of column 'locus'. If you wish to 'recycle' the RHS please use rep() to make this intent clear to readers of your code.
However, if I run it without specifying any of the parameters (so using the default settings), there is no problem and I get normal files and reports.
The problem is that I want to run ASpli with less strict thresholds than the default settings, so simply adding a filter with the desired values after running ASpli won't solve my problem. Do you maybe have a suggestion as to how to overcome this?
I am emailing you because I have run into a problem with ASpli. We have some new data that we want to analyse, but I get the following error when I try to run ASpli in the exact same manner that I have run it for the other data sets we are using:
[1] "integrate signals" Error in set(x, j = name, value = value) : Supplied 1059 items to be assigned to 1061 items of column 'locus'. If you wish to 'recycle' the RHS please use rep() to make this intent clear to readers of your code.
If I change the settings of the thresholds given for the "integrate signals" function, it seems to use the new values, but still runs into the same problem (I think when making a data frame of the results).
[1] "integrate signals" Error in set(x, j = name, value = value) : Supplied 1651 items to be assigned to 1653 items of column 'locus'. If you wish to 'recycle' the RHS please use rep() to make this intent clear to readers of your code.
However, if I run it without specifying any of the parameters (so using the default settings), there is no problem and I get normal files and reports.
The problem is that I want to run ASpli with less strict thresholds than the default settings, so simply adding a filter with the desired values after running ASpli won't solve my problem. Do you maybe have a suggestion as to how to overcome this?