chg60 / phamclust

Pham-based genome clustering
GNU General Public License v3.0
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A phage related question, how to find phages in bulk? #1

Closed Dx-wmc closed 11 months ago

Dx-wmc commented 11 months ago

Hi, I'd like to express my appreciation for your clustering method; it's truly impressive. Although my query might not be directly related to this specific tool, I hope you could provide some guidance. My experience in phage analysis is somewhat limited. At present, PHASTER is the go-to tool for phage prediction, yet its web version doesn't seem to handle large-scale operations very well. Could you shed some light on how you typically handle batch phage predictions?

Dx-wmc commented 11 months ago

I think this question may be more friendly to ask under depht.