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chhylp123 / hifiasm

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
MIT License
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Is hifi data enough? #149

Open yywyaoyaowu opened 3 years ago

yywyaoyaowu commented 3 years ago

Hi I have several assemble, the assembly size were 2.2G, while I have 22G hifi ccs data, I wonder if the data is enough. The busco is 97%. The Kmer distribution seems ok. I wonder if the hifiasm can evaluate if the data is enough. Based on your experience, how much data is enough? Thanks very much!

chhylp123 commented 3 years ago

Usually should be >=12x per haplotype.