search

chhylp123 / hifiasm

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
MIT License
529 stars 86 forks source link

core dump when assembly a genome. #335

Open weifei007 opened 1 year ago

weifei007 commented 1 year ago

when run hifiasm (0.16.1), I got the wrong log. I cannot find which part is wrong. please help tell me how to save this problem. hifiasm: htab.cpp:853: void mz1_worker_count(void, int, void*): Assertion `l == (int)p->rs_out->read_length[p->n_seq]' failed. step2.sh: line 1: 387982 已放弃 (core dumped)

chhylp123 commented 1 year ago

This always happened when the input fastq files have some issue. For example, see: https://github.com/chhylp123/hifiasm/issues/99