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chhylp123 / hifiasm

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
MIT License
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Question regarding phasing #439

Open dabitz opened 1 year ago

dabitz commented 1 year ago

Hi,

What is the best option to phase the assembly, parental data or Hi-C, or both? For a specific case, I have both data available.

Cheers André

chhylp123 commented 1 year ago

As long as there is the clear trio data, trio-binning should be better in most cases.