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chhylp123 / hifiasm

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
MIT License
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what is the default parameter for the minimum length of overlaps in hifiasm ? #528

Open mariellev opened 9 months ago

chhylp123 commented 9 months ago

There is no opition for that. But you could have a try with --b-cov, --h-cov and --m-rate to break contigs that are not such reliable.