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chhylp123 / hifiasm

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
MIT License
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overlap parameter #624

Open tianjio opened 6 months ago

tianjio commented 6 months ago

I am trying to assemble the haplotype genome. We have high depth HiFi data of about 150×, which we want to assemble through Hifiasm software and improve the accuracy by increasing the length of overlap. But I can't find any parameter item in your software that can be used to change the overlap length. Would you like to know if there is any recommended parameter? Or is it possible to add a parameter module?

chhylp123 commented 6 months ago

Sorry for the late reply. Let me add a new parameter for that. I will let you know once it works.

tianjio commented 5 months ago

Thanks