Closed maouw closed 1 month ago
Hi @maouw, thanks for bringing up this issue! I'm struggling to reproduce it. The files in bids-examples
that should be returned by this filter are:
synthetic/derivatives/fmriprep/sub-04/ses-01/func/sub-04_ses-01_task-rest_space-MNI152NLin2009cAsym_desc-preproc_bold.nii
synthetic/derivatives/fmriprep/sub-04/ses-01/func/sub-04_ses-01_task-rest_space-T1w_desc-preproc_bold.nii
synthetic/derivatives/fmriprep/sub-04/ses-02/func/sub-04_ses-02_task-rest_space-MNI152NLin2009cAsym_desc-preproc_bold.nii
synthetic/derivatives/fmriprep/sub-04/ses-02/func/sub-04_ses-02_task-rest_space-T1w_desc-preproc_bold.nii
synthetic/sub-04/ses-01/func/sub-04_ses-01_task-rest_bold.nii
synthetic/sub-04/ses-02/func/sub-04_ses-02_task-rest_bold.nii
Can you confirm that these files are present in your bids-examples
directory?
What is the shape of the full table (printed on cell 5)? It should be (10266, 40)
.
Closing since not able to reproduce. We can reopen later if it appears again.
https://github.com/childmindresearch/bids2table/blob/c3f4c12d97eb7bfb8f18da8ce4150ec3a2348493/example/example.ipynb fails at https://github.com/childmindresearch/bids2table/blob/c3f4c12d97eb7bfb8f18da8ce4150ec3a2348493/example/example.ipynb#L2627-L2637 .
Code:
Output: