Closed iimog closed 6 years ago
As dependencies jellyfish, spades and Moose are listed but there are more I stumbled across:
jellyfish
spades
Moose
log4perl
Term::ProgressBar
It might make sense to write a minimal docker image that is able to run chloroExtractor on a demo dataset.
File::Which
Clemens found the following additional dependencies that have to be added to the README:
README
Perl:
IPC::Run
Graph
binaries:
bowtie2
bedtools
tblastx
As dependencies
jellyfish
,spades
andMoose
are listed but there are more I stumbled across:log4perl
Term::ProgressBar
It might make sense to write a minimal docker image that is able to run chloroExtractor on a demo dataset.