Open iimog opened 6 years ago
I would suggest the following behaviour:
--no-keep
--keep
will keep the assembly folder, but will remove other intermediate files--keep
(similar to an enhanced verbosity mode by multiple --verbose
) will keep all intermediate output filesopinions?
In my opinion this is a good solution.
It is filed for version 2.0.0
ChloroExtractor creates multiple large temporary files (especially the jellyfish files can be multiple GB in size). An option like
--clean
to remove those temporary files and only keep the final output would be convenient. Alternatively the cleaning could be the default and an option like--keep-intermediates
could be introduced.