Added quickmodel.py for making figures and json files of analysis outputs.

choderalab / assaytools

Modeling and Bayesian analysis of fluorescence and absorbance assays.

http://assaytools.readthedocs.org

GNU Lesser General Public License v2.1

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Added quickmodel.py for making figures and json files of analysis outputs. #61

Closed sonyahanson closed 8 years ago

sonyahanson commented 8 years ago

Added quickmodel.py for making figures and json files of analysis outputs.

sonyahanson commented 8 years ago

This works! However, currently only applicable to singlet assays.

sonyahanson commented 8 years ago

Commented values leading to small number of iterations as mentioned here: https://github.com/choderalab/assaytools/issues/64

Upcoming changes:

Adding inputs as a command line argument of quickmodel.py instead of having to be run as a separate script
Adding --type option to quickmodel.py with spectra as an option for

sonyahanson commented 8 years ago

Done! Results of analyses with these scripts to be added https://github.com/choderalab/fluorescence-assay-manuscript/pull/10 as soon as they are done. (It takes about 7 minutes to do each analysis, and the full spectra 'set' is 16 datasets, so that will be in about 2 hours.)

sonyahanson commented 8 years ago

Good to go ahead and merge, this seems to be working fine.

sonyahanson commented 8 years ago

Since this wasn't merged, added a couple changes suggested in discussions of quickmodel results with various people.

sonyahanson commented 8 years ago

Merging.