Rework travis-ci for current conda infrastructure

choderalab / bayesian-itc

Python tools for the analysis and modeling of isothermal titration calorimetry (ITC) experiments.

GNU General Public License v3.0

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Rework travis-ci for current conda infrastructure #79

Open jchodera opened 6 years ago

bas-rustenburg commented 6 years ago

The ImportError: libopenblas.so.0: cannot open shared object file: No such file or directory reminds me of something @MehtapIsik ran into with pymc and assay tools. Fix back then was to add openblas to the dependencies list, since pymc doesnt seem to install it but does depend on it.

bas-rustenburg commented 6 years ago

Wait, it does install openblas. Strange...

jchodera commented 6 years ago

My guess is that it installs libgfortran from the anaconda channel but openblas from the conda-forge channel: https://travis-ci.org/choderalab/bayesian-itc/jobs/314440600#L878

It looks like we should just require libgfortran for the osx builds only? https://anaconda.org/search?q=libgfortran

I'll play with this a bit more later. I run into this all the time with pymc2.