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choishingwan / PRS-Tutorial

A tutorial on how to run basic polygenic risk score analysis
MIT License
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File hm3_variants.rds removed by privefl #24

Closed mathieu-lemire closed 3 years ago

mathieu-lemire commented 3 years ago

The file hm3_variants.rds you are referring to has been deleted by git user privefl in commit d2246511ff. You should update your LDPRED-2 doc by pointing to the last commit where it is still available:

https://github.com/privefl/bigsnpr/blob/b366f09c450819589fb7309219cc01b901f3d2be/data-raw/hm3_variants.rds

choishingwan commented 3 years ago

Thanks, LDpred2 has updated the path to the file location. We have now updated the tutorial to account for that. Thank you for your report