Open tamsinlh opened 1 year ago
My stats file has several thousand that passed, but my output vcf file is empty. I used the line below.
rad_haplotyper.pl -x 28 -v BIA.10FinalDPQMA.recode.vcf -b mapped.bed --genomic_ref -r reference.fasta --vcfout HT.10FinalDPQMABIA.recode.vcf
Please advise. HT.10FinalDPQMABIA.recode.txt
My stats file has several thousand that passed, but my output vcf file is empty. I used the line below.
rad_haplotyper.pl -x 28 -v BIA.10FinalDPQMA.recode.vcf -b mapped.bed --genomic_ref -r reference.fasta --vcfout HT.10FinalDPQMABIA.recode.vcf
Please advise. HT.10FinalDPQMABIA.recode.txt