choosehappy HistoQC issues

choosehappy / HistoQC

HistoQC is an open-source quality control tool for digital pathology slides

BSD 3-Clause Clear License

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issues

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Which features/ options will increase the tolerance of pen markings

#319 Himanshunitrr opened 1 month ago
1
Unsupported or missing image file

#318 Himanshunitrr closed 2 months ago
2
Searching for a particular WSI's results

#317 Himanshunitrr opened 3 months ago
1
fix #315 - BasicModule.countTissuePieces does not define the `params` parameter

#316 nanli-emory closed 2 months ago
5
countTissuePieces() takes 1 positional argument but 2 were given

#315 Himanshunitrr closed 2 months ago
1
Metrics definitions

#314 suminwei opened 3 months ago
1
Render CohortFinder test/train splits

#313 jacksonjacobs1 opened 3 months ago
0
Unable to process .bif files

#312 Himanshunitrr closed 3 months ago
4
html report

#311 suminwei closed 4 months ago
2
Unsupported TIFF compression: 7

#310 suminwei opened 4 months ago
4
Trouble mounting Windows network drive to docker container

#309 jacksonjacobs1 closed 3 months ago
5
FeatureRequest: Computation Time

#308 koellerMC opened 5 months ago
4
TemplateNotFound

#307 koellerMC opened 5 months ago
4
New feature that save mask as geojson format

#306 nanli-emory opened 5 months ago
10
add ray cluster launcher files for aws, azure, and gcp

#305 nanli-emory opened 5 months ago
5
<class 'TypeError'> Inappropriate argument type. __init__() should return None, not 'int'

#304 csittz opened 5 months ago
10
fixed debug argument bug

#303 jacksonjacobs1 closed 5 months ago
0
worker() got an unexpected keyword argument 'debug'

#302 pimooook closed 5 months ago
2
added debug option

#301 jacksonjacobs1 closed 6 months ago
2
Add "debug" mode & set matplotlib backend based on mode

#300 jacksonjacobs1 closed 6 months ago
0
Add "debug

#299 jacksonjacobs1 closed 6 months ago
0
Optionally save Geojson masks for Qupath & DSA compatibility

#298 jacksonjacobs1 opened 6 months ago
4
Performance Degradation and Magnification Selection Issue in HistoQC Processing

#297 SaharAlmahfouzNasser closed 3 months ago
11
get num tissues

#296 nanli-emory closed 3 months ago
6
added docker install to readme

#295 jacksonjacobs1 closed 6 months ago
0
using io.imsave(png_fname, img_as_ubyte(some_binary_mask)) to save compressed mask

#294 nanli-emory opened 6 months ago
5
Wrapping up CUDA support.

#293 CielAl opened 6 months ago
7
Testing gets stuck at test_cli_multiprocess

#292 YoihenBachu opened 6 months ago
5
Apply run length encoding while saving masks.

#291 jacksonjacobs1 opened 6 months ago
6
Full multiprocessing GPU support.

#290 CielAl opened 6 months ago
1
Blurry Region Detection Across Varied Slide Samples

#289 EmanuelSoda opened 7 months ago
3
Adding CUDA support in PR#287

#288 CielAl opened 7 months ago
3
Add CuImage handle for CUDA support and miscs.

#287 CielAl opened 7 months ago
1
replace v1 UI with v2 UI

#286 jacksonjacobs1 closed 6 months ago
2
[V2 UI]: create endpoint to get available image suffixes

#285 jacksonjacobs1 closed 9 months ago
1
[V2 UI]: Improve select-image view formatting

#284 jacksonjacobs1 closed 9 months ago
1
[V2 UI]: Make parcoords brushing update the scatter plot

#283 jacksonjacobs1 closed 9 months ago
1
[V2 UI]: Update responsive layout sizing

#282 jacksonjacobs1 closed 9 months ago
1
Update Dockerfile for ray-ml

#281 nanli-emory closed 8 months ago
5
Pagination

#280 jacksonjacobs1 closed 6 months ago
0
error check if mask is empty and abort early in LocalTextureEstimationModule.estimateGreyComatrixFeatures

#279 nanli-emory closed 10 months ago
1
Pipeline fails when no tissue remains

#278 jacksonjacobs1 closed 10 months ago
3
better tissue fold detection

#277 choosehappy opened 11 months ago
4
# of pieces of tissue - feature

#276 choosehappy closed 3 months ago
5
Beginner's question

#275 dlysiak opened 11 months ago
1
small update to setup.cfg makes pip install the import_wrapper module

#274 jacksonjacobs1 closed 11 months ago
0
added troubleshooting section to readme

#273 jacksonjacobs1 closed 10 months ago
2
small deconvolution bug fix

#272 jacksonjacobs1 closed 12 months ago
0
checking if array equals an empty string during deconvolution

#271 jacksonjacobs1 closed 11 months ago
1
\t inserted into results.tsv warnings

#270 jacksonjacobs1 closed 11 months ago
6