chop-dbhi / omop_harvest

OMOP CDMV4 data model with OSIM2 data in Harvest
https://eig.research.chop.edu/omop/
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Update DDL code #19

Closed gracebrownecodes closed 10 years ago

gracebrownecodes commented 10 years ago

Update the DDL code to match the progress in the PEDSnet repositories. This update should still allow for use of the OSIM2 datasets. For that reason, the remove_CDMV2_fields.sh script is added to pre-process OSIM2 data for use in the CDMV4 tables. The README is also modified to add this step, but needs more modification and a possible re-working of startup steps.

Fixes #16 Fixes #18

Signed-off-by: Aaron Browne aaron0browne@gmail.com