Query about eQTL summary selection for coloc analysis

chr1swallace / coloc

Repo for the R package coloc

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Query about eQTL summary selection for coloc analysis #124

Open TaoShiyue opened 1 year ago

TaoShiyue commented 1 year ago

Hi,

I'm using coloc for colocalization analysis between GWAS summary statistics and GTEx v8 eQTL data. I have a question that whether I should include all eQTL summaries or if using only significant eQTLs(provided by GTEx) is adequate for the analysis.

Thank you for your guidance!

Best, Shiyue