A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Development is now focused on building out support for multiallelic, phased, and dosage data in PLINK 2.0.
https://groups.google.com/g/plink2-users/c/0bdSodZJj-w/m/JDve-rBpBQAJ reports a case where there's a different underlying error that's incorrectly suppressed.