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chrisamiller / readDepth

R package for inferring copy number from read depth
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Running time is too long #18

Open newpest opened 1 week ago

newpest commented 1 week ago

Running a bed with 16,000,000 records has taken more than 10 hours, but it is still not completed. Can I split the bed file and run it again?

newpest commented 1 week ago

I found that when the number of records in the bed file exceeds 16000000, the running time will become very slow, and when it is less than 16000000, it will run very quickly.