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chrisquince / DESMAN

De novo Extraction of Strains from MetAgeNomes
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Replace ConfPlot.R #1

Open alneberg opened 8 years ago

alneberg commented 8 years ago

I don't like having to install the R packages needed everytime I use it since I don't understand R installations.

Getting rid of the R scripts should be doable, specifically this script should be quite easy to replace.

xapple commented 8 years ago

I see the language stats say:

Python 85.6% - Perl 10.3% - C 3.3% - Other 0.8%

You probably want to get rid of all that Perl too : )

alneberg commented 8 years ago

Hi there @xapple!

I haven't had any problems with the perl scripts as I can recall.

To be honest, the ConfPlot.R script is not even in this repo. It's a concoct script...

chrisquince commented 8 years ago

Well I would like to get to a point where it is all C and python and fewer python scripts. The R plots can probably be replaced by matplotlib without too much trouble. The perl can definitely be replaced by Python. We will keep this issue open as a long term aspiration :)

xapple commented 8 years ago

Tell me if you need some help with all that. I'll have much more free time soon : )