Add calculation of bin per sample coverages

chrisquince / STRONG

Strain Resolution ON Graphs

MIT License

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Closed chrisquince closed 4 years ago

chrisquince commented 4 years ago

This would be a very useful feature and just requires one extra rule.

Sebastien-Raguideau commented 4 years ago

I think we already have it for all mags. So, you propose we do it once, for all bins?

chrisquince commented 4 years ago

Do we have it for MAGs where is that output file?

Sebastien-Raguideau commented 4 years ago

No, I misrembered sorry, we have the average coverage over samples.

chrisquince commented 4 years ago

We can get the per sample bin coverage pretty easily from the Desman output anyway. I may add a rule for it.

Sebastien-Raguideau commented 4 years ago

it's in results now