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chrk623 / svydb

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Error in svydb #3

Open jieunparkmath opened 3 weeks ago

jieunparkmath commented 3 weeks ago

Hello. I have got the following error. Could you please check this out? I have attached the sessionInfo(), too. Thanks!

> library(svydb)
> data(nhane)
> nh.dbsurv = svydbdesign(st = SDMVSTRA, wt = WTMEC2YR, id = SDMVPSU, data = nha> svydbtotal(x = DirectChol, design = nh.dbsurv, num = T)
Error in mtfrm.default(list(message = "Quosures can only be unquoted within a quasiquotation context.\n\n  # Bad:\n  list(!!myquosure)\n\n  # Good:\n  dplyr::mutate(data, !!myquosure)",  : 
  cannot mtfrm
> sessionInfo()
R version 4.4.0 (2024-04-24)
Platform: x86_64-pc-linux-gnu
Running under: CentOS Linux 7 (Core)

Matrix products: default
BLAS:   /mmfs1/tools/r-4.4.0/lib64/R/lib/libRblas.so 
LAPACK: /mmfs1/tools/r-4.4.0/lib64/R/lib/libRlapack.so;  LAPACK version 3.12.0

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

time zone: America/Chicago
tzcode source: system (glibc)

attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods  
[8] base     

other attached packages:
 [1] lubridate_1.9.3 forcats_1.0.0   stringr_1.5.1   purrr_1.0.2    
 [5] readr_2.1.5     tidyr_1.3.1     tibble_3.2.1    tidyverse_2.0.0
 [9] svydb_0.1.1     ggplot2_3.5.1   survey_4.4-2    survival_3.7-0 
[13] Matrix_1.7-0    rlang_1.1.4     dplyr_1.1.4     R6_2.5.1       

loaded via a namespace (and not attached):
 [1] gtable_0.3.5      htmlwidgets_1.6.4 devtools_2.4.5    remotes_2.5.0    
 [5] processx_3.8.4    lattice_0.22-6    callr_3.7.6       tzdb_0.4.0       
 [9] vctrs_0.6.5       tools_4.4.0       ps_1.7.7          generics_0.1.3   
[13] curl_5.2.1        fansi_1.0.6       pkgconfig_2.0.3   desc_1.4.3       
[17] lifecycle_1.0.4   compiler_4.4.0    munsell_0.5.1     mitools_2.4      
[21] httpuv_1.6.15     htmltools_0.5.8.1 usethis_3.0.0     later_1.3.2      
[25] pillar_1.9.0      urlchecker_1.0.1  ellipsis_0.3.2    cachem_1.1.0     
[29] sessioninfo_1.2.2 mime_0.12         tidyselect_1.2.1  digest_0.6.36    
[33] stringi_1.8.4     splines_4.4.0     fastmap_1.2.0     colorspace_2.1-1 
[37] cli_3.6.3         magrittr_2.0.3    pkgbuild_1.4.4    utf8_1.2.4       
[41] withr_3.0.1       scales_1.3.0      promises_1.3.0    timechange_0.3.0 
[45] hms_1.1.3         memoise_2.0.1     shiny_1.9.1       miniUI_0.1.1.1   
[49] profvis_0.3.8     Rcpp_1.0.13       xtable_1.8-4      glue_1.7.0       
[53] DBI_1.2.3         pkgload_1.4.0     fs_1.6.4
chrk623 commented 2 weeks ago

There are quiet a lot of places with deprecated rlang functions, probably dplyr aswell. Can't spare time to fix all of them right now, but i pushed a hotfix to patch some errors. Should work for now but there may be some deprecation warnings.

devtools::install_github("chrk623/svydb@dev")

Let me know if it works.