Hi, I found the default comparison is to FindAllMarkers, but I want to compare two certain groups or compare some groups to one same group.
For example, there are five groups of cells in my single-cell Seurat dataset, i.e., A, B, C, D, and E. I want to compare E vs. A, E vs. B, E vs. C, and E vs. D. Is it possible to do this comparison, and get the consensus p-values/adjusted p-values? Thank you.
Hi, I found the default comparison is to FindAllMarkers, but I want to compare two certain groups or compare some groups to one same group. For example, there are five groups of cells in my single-cell Seurat dataset, i.e., A, B, C, D, and E. I want to compare E vs. A, E vs. B, E vs. C, and E vs. D. Is it possible to do this comparison, and get the consensus p-values/adjusted p-values? Thank you.